Package index
-
NBP()
CONCENTRATIONS_CO2()
NPP()
RH()
ATMOSPHERIC_CO2()
FFI_EMISSIONS()
DACCS_UPTAKE()
LUC_EMISSIONS()
LUC_UPTAKE()
CO2_CONSTRAIN()
NBP_CONSTRAIN()
VEG_C()
DETRITUS_C()
SOIL_C()
PERMAFROST_C()
THAWEDP_C()
FRAC_FROZEN()
FRAC_STATIC()
PERMAFROST_MU()
PERMAFROST_SIGMA()
FRAC_DECOMP_CH4()
EARTH_C()
NPP_FLUX0()
- Identifiers for variables in the Hector carbon cycle component
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CONCENTRATIONS_N2O()
PREINDUSTRIAL_N2O()
PREINDUSTRIAL_O3()
CONCENTRATIONS_O3()
- Identifiers for miscellaneous concentrations not elsewhere described
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FTOT_CONSTRAIN()
CH4_CONSTRAIN()
N2O_CONSTRAIN()
TAS_CONSTRAIN()
- Identifiers for constraints
-
create_biome()
- Create new biome
-
create_biome_impl()
- Create a biome
-
delete_biome_impl()
- Delete a biome
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DELTA_CO2()
RF_N2O()
DELTA_N2O()
DELTA_CF4()
DELTA_C2F6()
DELTA_HFC23()
DELTA_HFC32()
DELTA_HFC4310()
DELTA_HFC125()
DELTA_HFC134A()
DELTA_HFC143A()
DELTA_HFC227EA()
DELTA_HFC245FA()
DELTA_SF6()
DELTA_CFC11()
DELTA_CFC12()
DELTA_CFC113()
DELTA_CFC114()
DELTA_CFC115()
DELTA_CCL4()
DELTA_CH3CCL3()
DELTA_HCFC22()
DELTA_HCFC141B()
DELTA_HCFC142B()
DELTA_HALON1211()
DELTA_HALON1301()
DELTA_HALON2402()
DELTA_CH3CL()
DELTA_CH3BR()
DELTA_CH4()
- Identifiers for Hector forcing component parameters
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EMISSIONS_BC()
EMISSIONS_N2O()
NAT_EMISSIONS_N2O()
EMISSIONS_NOX()
EMISSIONS_CO()
EMISSIONS_NMVOC()
EMISSIONS_OC()
EMISSIONS_NH3()
- Identifiers for miscellaneous emissions not elsewhere described
-
fetchvars()
- Fetch results from a running Hector core
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RF_TOTAL()
RF_ALBEDO()
RF_CO2()
RF_H2O_STRAT()
RF_O3_TROP()
RF_BC()
RF_OC()
RF_NH3()
RF_SO2()
RF_ACI()
RF_VOL()
RF_MISC()
Q_CO2()
RF_CH4()
- Identifiers for capabilities in the Hector forcing component
-
fxntable
- A data.frame containing information R hector function name and hector string names.
-
get_biome_inits()
- Retrieve the initial conditions and parameters for a given biome
-
get_biome_list()
- Retrieve the current list of biomes for a Hector instance
-
get_tracking_data()
- Retrieve the tracking data for a Hector instance
-
get_tracking_data_impl()
- Retrieve the tracking data for a Hector instance
-
getfxn()
- Get the hector function associated with a specific string
-
getunits()
- Get the hector unit strings for one or more variables
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CF4_CONSTRAIN()
C2F6_CONSTRAIN()
HFC23_CONSTRAIN()
HFC32_CONSTRAIN()
HFC4310_CONSTRAIN()
HFC125_CONSTRAIN()
HFC134A_CONSTRAIN()
HFC143A_CONSTRAIN()
HFC227EA_CONSTRAIN()
HFC245FA_CONSTRAIN()
SF6_CONSTRAIN()
CFC11_CONSTRAIN()
CFC12_CONSTRAIN()
CFC113_CONSTRAIN()
CFC114_CONSTRAIN()
CFC115_CONSTRAIN()
CCL4_CONSTRAIN()
CH3CCL3_CONSTRAIN()
HCFC22_CONSTRAIN()
HCFC141B_CONSTRAIN()
HCFC142B_CONSTRAIN()
HALON1211_CONSTRAIN()
HALON1301_CONSTRAIN()
HALON2402_CONSTRAIN()
CH3CL_CONSTRAIN()
CH3BR_CONSTRAIN()
- Identifiers for halocarbon concentration constraints
-
EMISSIONS_CF4()
EMISSIONS_C2F6()
EMISSIONS_HFC23()
EMISSIONS_HFC32()
EMISSIONS_HFC4310()
EMISSIONS_HFC125()
EMISSIONS_HFC134A()
EMISSIONS_HFC143A()
EMISSIONS_HFC227EA()
EMISSIONS_HFC245FA()
EMISSIONS_SF6()
EMISSIONS_CFC11()
EMISSIONS_CFC12()
EMISSIONS_CFC113()
EMISSIONS_CFC114()
EMISSIONS_CFC115()
EMISSIONS_CCL4()
EMISSIONS_CH3CCL3()
EMISSIONS_HCFC22()
EMISSIONS_HCFC141B()
EMISSIONS_HCFC142B()
EMISSIONS_HALON1211()
EMISSIONS_HALON1301()
EMISSIONS_HALON2402()
EMISSIONS_CH3CL()
EMISSIONS_CH3BR()
- Identifiers for halocarbon emissions
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RF_CF4()
RF_C2F6()
RF_HFC23()
RF_HFC32()
RF_HFC4310()
RF_HFC125()
RF_HFC134A()
RF_HFC143A()
RF_HFC227EA()
RF_HFC245FA()
RF_SF6()
RF_CFC11()
RF_CFC12()
RF_CFC113()
RF_CFC114()
RF_CFC115()
RF_CCL4()
RF_CH3CCL3()
RF_HCFC22()
RF_HCFC141B()
RF_HCFC142B()
RF_HALON1211()
RF_HALON1301()
RF_HALON2402()
RF_CH3CL()
RF_CH3BR()
- Identifiers for halocarbon forcings
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getdate()
isactive()
startdate()
enddate()
getname()
- getdate: Get the current date for a Hector instance
-
inputstable
- A data.frame containing information on all of the Hector inputs listed in an ini file created by save-input-params.R.
-
LL_DEBUG()
LL_NOTICE()
LL_WARNING()
LL_SEVERE()
- Hector logging levels
-
CONCENTRATIONS_CH4()
PREINDUSTRIAL_CH4()
EMISSIONS_CH4()
NATURAL_CH4()
LIFETIME_SOIL()
LIFETIME_STRAT()
- Identifiers for quantities in the methane component
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format(<hcore>)
print(<hcore>)
- Hector instance object methods
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newcore()
- Create and initialize a new hector instance
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OCEAN_UPTAKE()
OCEAN_C()
OCEAN_C_HL()
OCEAN_C_LL()
OCEAN_C_ML()
OCEAN_C_IO()
OCEAN_C_DO()
OCEAN_PREIND_C_SURF()
OCEAN_PREIND_C_ID()
TT()
TU()
TWI()
TID()
PH_HL()
PH_LL()
PH()
HL_OCEAN_UPTAKE()
LL_OCEAN_UPTAKE()
PCO2_HL()
PCO2_LL()
PCO2()
DIC_HL()
DIC()
DIC_LL()
SST_HL()
SST_LL()
CO3_LL()
CO3_HL()
CO3()
- Identifiers for quantities in the ocean component
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TRACKING_DATE()
PREINDUSTRIAL_CO2()
BETA()
Q10_RH()
WARMINGFACTOR()
F_NPPV()
F_NPPD()
F_LITTERD()
ECS()
AERO_SCALE()
VOLCANIC_SCALE()
LO_WARMING_RATIO()
DIFFUSIVITY()
- Identifiers for model parameters
-
rename_biome()
- Rename an existing biome
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reset()
- Reset a Hector instance to an earlier date
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RHO_BC()
RHO_OC()
RHO_NH3()
RHO_SO2()
RHO_CF4()
RHO_C2F6()
RHO_HFC23()
RHO_HFC32()
RHO_HFC4310()
RHO_HFC125()
RHO_HFC134A()
RHO_HFC143A()
RHO_HFC227EA()
RHO_HFC245FA()
RHO_SF6()
RHO_CFC11()
RHO_CFC12()
RHO_CFC113()
RHO_CFC114()
RHO_CFC115()
RHO_CCL4()
RHO_CH3CCL3()
RHO_HCFC22()
RHO_HCFC141B()
RHO_HCFC142B()
RHO_HALON1211()
RHO_HALON1301()
RHO_HALON2402()
RHO_CH3CL()
RHO_CH3BR()
- Identifiers for Hector forcing component parameters
-
run()
- Run the Hector climate model
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runscenario()
- Run a single scenario
-
sendmessage()
- Send a message to a Hector instance
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setvar()
- Set values for a Hector variable
-
shutdown()
- Shut down a hector instance
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EMISSIONS_SO2()
VOLCANIC_SO2()
- Identifiers for quantities in the SO2 component
-
split_biome()
- Create new biomes by splitting up an existing biome
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GLOBAL_TAS()
GMST()
SST()
OCEAN_TAS()
LAND_TAS()
FLUX_MIXED()
FLUX_INTERIOR()
HEAT_FLUX()
- Identifiers for variables associated with the temperature component
-
unitstable
- A data.frame containing information on all of the Hector variable created by units-data.R used within the getunits function.